College of Agricultural Sciences

P. J. Bottomley and Myrold, D. D., “Biological nitrogen fixation: The return of N to the soil”, in Soil Microbiology, Ecology, and Biochemistry, 3rdrd ed., Burlington, MA: Academic Press, 2007, pp. 365-387.

P. J. Bottomley and Myrold, D. D., “Biological nitrogen fixation: The return of N to the soil”, in Soil Microbiology, Ecology, and Biochemistry, 4thth ed., San Diego, CA: Academic Press, 2015, pp. 447-470.

D. D. Myrold and Nannipieri, P., “Classical Techniques Versus Omics Approaches”, in Omics in Soil Science , 2014.

C. F. Drury, Myrold, D. D., Beauchamp, G., and Reynolds, W. D., “Denitrification techniques for soils”, in Sampling and Methods of Analysis, 2ndnd ed., Boca Raton, FL.: CRC Press, Taylor & Francis Group, 2007, pp. 471-493.

D. D. Myrold, Pett-Ridge, J., and Bottomley, P. J., “Nitrogen Mineralization and Assimilation at Millimeter Scales”, in Methods in Enzymolog, vol. 496, 2011.

D. D. Myrold and Bottomley, P. J., “Nitrogen mineralization and immobilization”, in Nitrogen in Agricultural Soils, Madison, WI: American Society of Agronomy, 2008, pp. 157-172.

D. D. Myrold, “Quantification of nitrogen transformations”, in Manual of Environmental Microbiology, 3rdrd ed., Washington, DC.: ASM Press, 2007, pp. 687-696.

J. R. Cole, Myrold, D. D., Nakatsu, C. H., Owens, P. R., Kowalchuk, G. A., Tebbe, C. C., and Tiedje, T. M., “Development of soil metadata standards for international DNA sequence databases”, in Proceedings of the 19th World Congress of Soil Science, Soil Solutions for a Changing World, 2010.

D. D. Myrold, Bottomley, P. J., Högberg, M. N., Högberg, P., and Sulzman, E. W., “Linking microbial communities to activity in soil with molecular and stable isotope techniques”, in Linking Management to Global Climate Challenges: The Proceedings of the International Symposium on Forest Soils and Ecosystem Health, Griffith University, Brisbane, Australia, 2007.

L. H. Zeglin, Bottomley, P. J., Jumpponen, A., Rice, C. W., Arango, M., Lindsley, A. E., McGowan, A., Mfombep, P., and Myrold, D. D., “Altered precipitation regime affects the function and composition of soil microbial communities on multiple time scales”, Ecology, vol. 94, no. 10, pp. 2334 - 2345, 2013.

J. Nesme, Achouak, W., Agathos, S. N., Bailey, M., Baldrian, P., Brunel, D., ård, Å., Heulin, T., Jansson, J. K., Jurkevitch, E., Kruus, K. L., Kowalchuk, G. A., Lagares, A., Lappin-Scott, H. M., Lemanceau, P., Le Paslier, D., Mandic-Mulec, I., J. Murrell, C., Myrold, D. D., Nalin, R., Nannipieri, P., Neufeld, J. D., O'Gara, F., Parnell, J. J., Pühler, A., Pylro, V., Ramos, J. L., Roesch, L. F. W., Schloter, M., Schleper, C., Sczyrba, A., Sessitsch, A., Sjöling, S., ørensen, J., ørensen, ørenJ., Tebbe, C. C., Topp, E., Tsiamis, G., van Elsas, J. Dirk, van Keulen, G., Widmer, F., Wagner, M., Zhang, T., Zhang, X., Zhao, L., Zhu, Y. - G., Vogel, T. M., and Simonet, P., “Back to the Future of Soil Metagenomics”, Frontiers in Microbiology, vol. 7, no. 73, 2016.

L. H. Zeglin, Taylor, A. E., Myrold, D. D., and Bottomley, P. J., “Bacterial and archaeal amoA gene distribution covaries with soil nitrification properties across a range of land uses”, Environmental Microbiology Reports, vol. 3, no. 6, pp. 717 - 726, 2011.

S. A. Boyle, Yarwood, R. R., Bottomley, P. J., and Myrold, D. D., “Bacterial and fungal contributions to soil nitrogen cycling under Douglas fir and red alder at two sites in Oregon”, Soil Biology and Biochemistry, vol. 40, no. 2, pp. 443 - 451, 2008.

M. A. Williams, Myrold, D. D., and Bottomley, P. J., “Carbon flow from 13C-labeled straw and root residues into the phospholipid fatty acids of a soil microbial community under field conditions”, Soil Biology and Biochemistry, vol. 38, no. 4, pp. 759 - 768, 2006.

S. A. Boyle-Yarwood, Bottomley, P. J., and Myrold, D. D., “Community composition of ammonia-oxidizing bacteria and archaea in soils under stands of red alder and Douglas fir in Oregon”, Environmental Microbiology, vol. 107, no. 11, pp. 2956 - 2965, 2008.

G. Chaer, Fernandes, M., Myrold, D. D., and Bottomley, P. J., “Comparative Resistance and Resilience of Soil Microbial Communities and Enzyme Activities in Adjacent Native Forest and Agricultural Soils”, Microbial Ecology, vol. 58, no. 2, pp. 414 - 424, 2009.

P. J. Bottomley, Taylor, A. E., and Myrold, D. D., “A consideration of the relative contributions of different microbial subpopulations to the soil N cycle”, Frontiers in Microbiology, vol. 3, 2012.

M. N. ögberg, Myrold, D. D., Giesler, R., and ögberg, P., “Contrasting patterns of soil N-cycling in model ecosystems of Fennoscandian boreal forests”, Oecologia, vol. 14, no. 1, pp. 96 - 107, 2006.

X. Lu, Bottomley, P. J., and Myrold, D. D., “Contributions of ammonia-oxidizing archaea and bacteria to nitrification in Oregon forest soils”, Soil Biology and Biochemistry, vol. 85, pp. 54 - 62, 2015.

J. H. Davis, Griffith, S. M., Horwath, W. R., Steiner, J. J., and Myrold, D. D., “Denitrification and Nitrate Consumption in an Herbaceous Riparian Area and Perennial Ryegrass Seed Cropping System”, Soil Science Society of America Journal, vol. 72, no. 5, p. 1299, 2008.

L. A. Kluber, Smith, J. E., and Myrold, D. D., “Distinctive fungal and bacterial communities are associated with mats formed by ectomycorrhizal fungi”, Soil Biology and Biochemistry, vol. 43, no. 5, pp. 1042 - 1050, 2011.

M. A. Williams, Myrold, D. D., and Bottomley, P. J., “Distribution and fate of 13C-labeled root and straw residues from ryegrass and crimson clover in soil under western Oregon field conditions”, Biology and Fertility of Soils, vol. 42, no. 6, pp. 523 - 531, 2006.

A. Khan, Myrold, D. D., and Misra, A. K., “Distribution of Frankia genotypes occupying Alnus nepalensis nodules with respect to altitude and soil characteristics in the Sikkim Himalayas”, Physiologia Plantarum, vol. 13, no. 3, pp. 364 - 371, 2007.

A. E. Taylor, Zeglin, L. H., Wanzek, T. A., Myrold, D. D., and Bottomley, P. J., “Dynamics of ammonia-oxidizing archaea and bacteria populations and contributions to soil nitrification potentials”, The ISME Journal, vol. 6, no. 11, pp. 2024 - 2032, 2012.

E. Hiltbrunner, Aerts, R., ühlmann, T., Huss-Danell, K., Magnusson, B., Myrold, D. D., Reed, S. C., Sigurdsson, B. D., and Körner, C., “Ecological consequences of the expansion of N2-fixing plants in cold biomes”, Oecologia, vol. 176, no. 1, pp. 11 - 24, 2014.