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Found 26 results
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Signal Transduction
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2018
S. Naithani
,
Preece, J.
,
D’Eustachio, P.
,
Gupta, P.
,
Amarasinghe, V.
,
Dharmawardhana, P. D.
,
Wu, G.
,
Fabregat, A.
,
Elser, J. L.
,
Weiser, J.
,
Keays, M.
,
Fuentes, A. Munoz- Pome
,
Petryszak, R.
,
Stein, L. D.
,
Ware, D.
, and
Jaiswal, P.
,
“
Plant Reactome: a resource for plant pathways and comparative analysis.
”
,
Nucleic acids research
, vol. 45, pp. D1029-D1039, 2018.
2017
E. F. O'Donnell
,
Jang, H. Sang
,
Pearce, M. C.
,
Kerkvliet, N. I.
, and
Kolluri, S.
,
“
The aryl hydrocarbon receptor is required for induction of p21cip1/waf1 expression and growth inhibition by SU5416 in hepatoma cells.
”
,
Oncotarget
, vol. 8, no. 15, pp. 25211-25225, 2017.
S. Naithani
and
Jaiswal, P.
,
“
Pathway Analysis and Omics Data Visualization Using Pathway Genome Databases: FragariaCyc, a Case Study.
”
,
Methods in molecular biology (Clifton, N.J.)
, vol. 1533, pp. 241-256, 2017.
2016
S. Dagdeviren
,
Jung, D. Young
,
Lee, E.
,
Friedline, R. H.
,
Noh, H. Lim
,
Kim, J. Hun
,
Patel, P. R.
,
Tsitsilianos, N.
,
Tsitsilianos, A. V.
,
Tran, D. A.
,
Tsougranis, G. H.
,
Kearns, C. C.
,
Uong, C. P.
,
Kwon, J. Yeon
,
Muller, W.
,
Lee, K. Won
, and
Kim, J. K.
,
“
Altered Interleukin-10 Signaling in Skeletal Muscle Regulates Obesity-Mediated Inflammation and Insulin Resistance.
”
,
Mol Cell Biol
, vol. 36, no. 23, pp. 2956-2966, 2016.
2015
M. Bionaz
,
Monaco, E.
, and
Wheeler, M. B.
,
“
Transcription Adaptation during In Vitro Adipogenesis and Osteogenesis of Porcine Mesenchymal Stem Cells: Dynamics of Pathways, Biological Processes, Up-Stream Regulators, and Gene Networks.
”
,
PLoS One
, vol. 10, no. 9, p. e0137644, 2015.
2014
S. M. Bugel
,
Bonventre, J. A.
,
White, L. A.
,
Tanguay, R. L.
, and
Cooper, K. R.
,
“
Chronic exposure of killifish to a highly polluted environment desensitizes estrogen-responsive reproductive and biomarker genes.
”
,
Aquat Toxicol
, vol. 152, pp. 222-31, 2014.
2012
E. F. O'Donnell
,
Kopparapu, P. Rao
,
Koch, D. C.
,
Jang, H. Sang
,
Phillips, J. Lynne
,
Tanguay, R. L.
,
Kerkvliet, N. I.
, and
Kolluri, S. Kumar
,
“
The aryl hydrocarbon receptor mediates leflunomide-induced growth inhibition of melanoma cells.
”
,
PLoS One
, vol. 7, no. 7, p. e40926, 2012.
M. Bionaz
,
Thering, B. J.
, and
Loor, J. J.
,
“
Fine metabolic regulation in ruminants via nutrient-gene interactions: saturated long-chain fatty acids increase expression of genes involved in lipid metabolism and immune response partly through PPAR-α activation.
”
,
Br J Nutr
, vol. 107, no. 2, pp. 179-91, 2012.
J. Yeon Kwon
,
Seo, S. Gwon
,
Yue, S.
,
Cheng, J. - X.
,
Lee, K. Won
, and
Kim, K. - H.
,
“
An inhibitory effect of resveratrol in the mitotic clonal expansion and insulin signaling pathway in the early phase of adipogenesis.
”
,
Nutr Res
, vol. 32, no. 8, pp. 607-16, 2012.
J. Yeon Kwon
,
Seo, S. Gwon
,
Heo, Y. - S.
,
Yue, S.
,
Cheng, J. - X.
,
Lee, K. Won
, and
Kim, K. - H.
,
“
Piceatannol, natural polyphenolic stilbene, inhibits adipogenesis via modulation of mitotic clonal expansion and insulin receptor-dependent insulin signaling in early phase of differentiation.
”
,
J Biol Chem
, vol. 287, no. 14, pp. 11566-78, 2012.
E. Monaco
,
Bionaz, M.
,
Rodriguez-Zas, S.
,
Hurley, W. L.
, and
Wheeler, M. B.
,
“
Transcriptomics comparison between porcine adipose and bone marrow mesenchymal stem cells during in vitro osteogenic and adipogenic differentiation.
”
,
PLoS One
, vol. 7, no. 3, p. e32481, 2012.
2011
T. - G. Lim
,
Lee, B. Kyung
,
Kwon, J. Yeon
,
Jung, S. Keun
, and
Lee, K. Won
,
“
Acrylamide up-regulates cyclooxygenase-2 expression through the MEK/ERK signaling pathway in mouse epidermal cells.
”
,
Food Chem Toxicol
, vol. 49, no. 6, pp. 1249-54, 2011.
2010
J. - E. Kim
,
Kwon, J. Yeon
,
Seo, S. Kwon
,
Son, J. Eun
,
Jung, S. Keun
,
Min, S. Yun
,
Hwang, M. Kyung
,
Heo, Y. - S.
,
Lee, K. Won
, and
Lee, H. Joo
,
“
Cyanidin suppresses ultraviolet B-induced COX-2 expression in epidermal cells by targeting MKK4, MEK1, and Raf-1.
”
,
Biochem Pharmacol
, vol. 79, no. 10, pp. 1473-82, 2010.
T. L. Tal
,
Franzosa, J. A.
, and
Tanguay, R. L.
,
“
Molecular signaling networks that choreograph epimorphic fin regeneration in zebrafish - a mini-review.
”
,
Gerontology
, vol. 56, no. 2, pp. 231-40, 2010.
2009
L. K. Mathew
,
Simonich, M. T.
, and
Tanguay, R. L.
,
“
AHR-dependent misregulation of Wnt signaling disrupts tissue regeneration.
”
,
Biochem Pharmacol
, vol. 77, no. 4, pp. 498-507, 2009.
L. K. Mathew
,
Sengupta, S.
,
Franzosa, J. A.
,
Perry, J.
,
La Du, J.
,
Andreasen, E. A.
, and
Tanguay, R. L.
,
“
Comparative expression profiling reveals an essential role for raldh2 in epimorphic regeneration.
”
,
J Biol Chem
, vol. 284, no. 48, pp. 33642-53, 2009.
K. M. Moyes
,
Drackley, J. K.
,
Morin, D. E.
,
Bionaz, M.
,
Rodriguez-Zas, S. L.
,
Everts, R. E.
,
Lewin, H. A.
, and
Loor, J. J.
,
“
Gene network and pathway analysis of bovine mammary tissue challenged with Streptococcus uberis reveals induction of cell proliferation and inhibition of PPARgamma signaling..
”
,
BMC Genomics
, vol. 10, p. 542, 2009.
2008
R. L. Tanguay
and
Reimers, M. J.
,
“
Analysis of ethanol developmental toxicity in zebrafish.
”
,
Methods Mol Biol
, vol. 447, pp. 63-74, 2008.
F. Stormshak
and
Bishop, C.
,
“
Board-invited review: Estrogen and progesterone signaling: genomic and nongenomic actions in domestic ruminants.
”
,
J Anim Sci
, vol. 86, no. 2, pp. 299-315, 2008.
N. Joo Kang
,
Lee, K. Won
,
Kwon, J. Yeon
,
Hwang, M. Kyung
,
Rogozin, E. A.
,
Heo, Y. - S.
,
Bode, A. M.
,
Lee, H. Joo
, and
Dong, Z.
,
“
Delphinidin attenuates neoplastic transformation in JB6 Cl41 mouse epidermal cells by blocking Raf/mitogen-activated protein kinase kinase/extracellular signal-regulated kinase signaling.
”
,
Cancer Prev Res (Phila)
, vol. 1, no. 7, pp. 522-31, 2008.
C. Bishop
and
Stormshak, F.
,
“
Non-genomic actions of progesterone and estrogens in regulating reproductive events in domestic animals.
”
,
Vet J
, vol. 176, no. 3, pp. 270-80, 2008.
B. R. Evans
,
Karchner, S. I.
,
Allan, L. L.
,
Pollenz, R. S.
,
Tanguay, R. L.
,
Jenny, M. J.
,
Sherr, D. H.
, and
Hahn, M. E.
,
“
Repression of aryl hydrocarbon receptor (AHR) signaling by AHR repressor: role of DNA binding and competition for AHR nuclear translocator.
”
,
Mol Pharmacol
, vol. 73, no. 2, pp. 387-98, 2008.
2007
I. Orhanovic
,
Crinon, R. J.
,
Chaplen, F. W. R.
, and
Weisshaar, A.
,
“
Signal transduction pathway modeling using sequences of chromatophore images.
”
,
IEEE Trans Nanobioscience
, vol. 6, no. 3, pp. 210-8, 2007.
L. K. Mathew
,
Sengupta, S.
,
Kawakami, A.
,
Andreasen, E. A.
,
Löhr, C. V.
,
Loynes, C. A.
,
Renshaw, S. A.
,
Peterson, R. T.
, and
Tanguay, R. L.
,
“
Unraveling tissue regeneration pathways using chemical genetics.
”
,
J Biol Chem
, vol. 282, no. 48, pp. 35202-10, 2007.
2006
C. Benedict
,
Skinner, J. S.
,
Meng, R.
,
Chang, Y.
,
Bhalerao, R.
,
Huner, N. P. A.
,
Finn, C. E.
,
Chen, T. H. H.
, and
Hurry, V.
,
“
The CBF1-dependent low temperature signalling pathway, regulon and increase in freeze tolerance are conserved in Populus spp.
”
,
Plant Cell Environ
, vol. 29, no. 7, pp. 1259-72, 2006.
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