Biblio
“Is microbial community composition in boreal forest soils determined by pH, C-to-N ratio, the trees, or all three?”, Oecologia, vol. 15, no. 4, pp. 590 - 601, 2006.
, “Measuring aerobic respiration in stream ecosystems using the resazurin-resorufin system”, Journal of Geophysical Research: Biogeosciences, vol. 117, no. G314, p. n/a - n/a, 2012.
, “Linking microbial communities to activity in soil with molecular and stable isotope techniques”, in Linking Management to Global Climate Challenges: The Proceedings of the International Symposium on Forest Soils and Ecosystem Health, Griffith University, Brisbane, Australia, 2007.
, “Inhibitory Effects of C2 to C10 1-Alkynes on Ammonia Oxidation in Two Nitrososphaera Species”, Applied and Environmental Microbiology, vol. 81, no. 6, pp. 1942 - 1948, 2015.
, “Influence of Calcium Carbonate and Charcoal Applications on Organic Matter Storage in Silt-Sized Aggregates Formed during a Microcosm Experiment”, Soil Science Society of America Journal, vol. 78, no. 5, p. 1624, 2014.
, “In search of key soil functions to assess soil community management for sustainable sweet cherry orchards”, Hortsci, vol. 43, pp. 38-44, 2008.
, “The importance of amino sugar turnover to C and N cycling in organic horizons of old-growth Douglas-fir forest soils colonized by ectomycorrhizal mats”, Biogeochemistry, vol. 112, no. 1-356610484658128621122315162951022–328–91211236462929, pp. 679 - 693, 2013.
, “Host species and habitat affect nodulation by specific Frankia genotypes in two species of Alnus in interior Alaska”, Oecologia, vol. 160, no. 4, pp. 619 - 630, 2009.
, “Fungal but not bacterial soil communities recover after termination of decadal nitrogen additions to boreal forest”, Soil Biology and Biochemistry, vol. 72, pp. 35 - 43, 2014.
, “The founding charter of the Genomic Observatories Network”, GigaScience, vol. 3, no. 1, 2014.
, “FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus”, Nucleic Acids Research, vol. 42, no. 19, pp. e145 - e145, 2014.
, “Fate of Nitrogen-15 in a Perennial Ryegrass Seed Field and Herbaceous Riparian Area”, Soil Science Society of America Journal, vol. 70, no. 3, p. 909, 2006.
, “Fate of Decomposed Fungal Cell Wall Material in Organic Horizons of Old-Growth Douglas-fir Forest Soils”, Soil Science Society of America Journal, vol. 77, no. 2, p. 489, 2013.
, “Evidence for Different Contributions of Archaea and Bacteria to the Ammonia-Oxidizing Potential of Diverse Oregon Soils”, Applied and Environmental Microbiology, vol. 76, no. 23, pp. 7691 - 7698, 2010.
, “Environmental controls on denitrifying communities and denitrification rates: insights from molecular methods.”, Ecol Appl, vol. 16, no. 6, pp. 2143-52, 2006.
, “Effects of disturbance scale on soil microbial communities in the Western Cascades of Oregon”, Plant and Soil, vol. 372, no. 1-2, pp. 459 - 471, 2013.
, “Ectomycorrhizal mats alter forest soil biogeochemistry”, Soil Biology and Biochemistry, vol. 42, no. 9, pp. 1607 - 1613, 2010.
, “Ecological consequences of the expansion of N2-fixing plants in cold biomes”, Oecologia, vol. 176, no. 1, pp. 11 - 24, 2014.
, “Dynamics of ammonia-oxidizing archaea and bacteria populations and contributions to soil nitrification potentials”, The ISME Journal, vol. 6, no. 11, pp. 2024 - 2032, 2012.
, “Distribution of Frankia genotypes occupying Alnus nepalensis nodules with respect to altitude and soil characteristics in the Sikkim Himalayas”, Physiologia Plantarum, vol. 13, no. 3, pp. 364 - 371, 2007.
, “Distribution and fate of 13C-labeled root and straw residues from ryegrass and crimson clover in soil under western Oregon field conditions”, Biology and Fertility of Soils, vol. 42, no. 6, pp. 523 - 531, 2006.
, “Distinctive fungal and bacterial communities are associated with mats formed by ectomycorrhizal fungi”, Soil Biology and Biochemistry, vol. 43, no. 5, pp. 1042 - 1050, 2011.
, “Development of soil metadata standards for international DNA sequence databases”, in Proceedings of the 19th World Congress of Soil Science, Soil Solutions for a Changing World, 2010.
, “Denitrification techniques for soils”, in Sampling and Methods of Analysis, 2ndnd ed., Boca Raton, FL.: CRC Press, Taylor & Francis Group, 2007, pp. 471-493.
, “Denitrification and Nitrate Consumption in an Herbaceous Riparian Area and Perennial Ryegrass Seed Cropping System”, Soil Science Society of America Journal, vol. 72, no. 5, p. 1299, 2008.
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